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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_7AS_FDD164762.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 135aa MW: 15624 Da PI: 10.8423 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.9 | 2.9e-10 | 47 | 87 | 13 | 53 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 NR +A rs +RK +i eLe+kv++L ae ++L +l l Traes_7AS_FDD164762.2 47 NRQSAARSKERKMRYISELERKVQTLHAEATTLSTQLALLH 87 **********************************9998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-9 | 39 | 99 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 8.34E-18 | 42 | 91 | No hit | No description |
SuperFamily | SSF57959 | 2.04E-10 | 42 | 90 | No hit | No description |
PROSITE profile | PS50217 | 9.381 | 43 | 100 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.7E-9 | 46 | 94 | No hit | No description |
Pfam | PF00170 | 1.9E-8 | 46 | 87 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence Send to blast |
MHDVIRRTGK SLPRKWQLTL VSPSVRKVPN YLCLLSLHNS CDRIWANRQS AARSKERKMR 60 YISELERKVQ TLHAEATTLS TQLALLHRDT AGLSTENSEL KMRLQNVEQQ IHLQDGKVSN 120 SSYSLSFTFF VLPRM |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK376677 | 1e-100 | AK376677.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3131F12. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010052397.1 | 2e-36 | PREDICTED: probable transcription factor PosF21 isoform X2 | ||||
Swissprot | Q69IL4 | 5e-37 | RF2A_ORYSJ; Transcription factor RF2a | ||||
TrEMBL | W5HJV4 | 8e-97 | W5HJV4_WHEAT; Uncharacterized protein | ||||
STRING | BRADI3G41817.1 | 1e-42 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP17792 | 7 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 5e-35 | bZIP family protein |
Publications ? help Back to Top | |||
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